Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | DXC16_21280 | Not Available | Positive | 4745483 - 4745974 | 18182.0 |
| energy transducer tonb | DXC16_21285 | Not Available | Negative | 4746430 - 4747515 | 41925.6 |
| ketol-acid reductoisomerase | DXC16_21290 | Not Available | Negative | 4747643 - 4748686 | 38168.5 |
| acyl-[acyl-carrier-protein] thioesterase | DXC16_21295 | Not Available | Negative | 4748721 - 4749464 | 28470.1 |
| acetolactate synthase small subunit | DXC16_21300 | Not Available | Negative | 4749464 - 4750018 | 21284.6 |
| biosynthetic-type acetolactate synthase large subunit | DXC16_21305 | Not Available | Negative | 4750029 - 4751726 | 61841.6 |
| dihydroxy-acid dehydratase | DXC16_21310 | Not Available | Negative | 4751826 - 4753628 | 64117.2 |
| hypothetical protein | DXC16_21315 | Not Available | Negative | 4754039 - 4754413 | 14063.1 |
| peptidylprolyl isomerase | DXC16_21320 | Not Available | Positive | 4754776 - 4755354 | 21017.5 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_21325 | Not Available | Negative | 4755502 - 4756944 | 54912.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

