Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein | DXC16_21230 | Not Available | Negative | 4726226 - 4727248 | 36937.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DXC16_21235 | Not Available | Negative | 4727361 - 4728884 | 56222.2 |
| inorganic phosphate transporter | DXC16_21240 | Not Available | Positive | 4729165 - 4731417 | 83827.5 |
| aminoglycoside phosphotransferase | DXC16_21245 | Not Available | Positive | 4731525 - 4732607 | 41591.0 |
| s9 family peptidase | DXC16_21250 | Not Available | Negative | 4732693 - 4735134 | 94292.0 |
| hypothetical protein | DXC16_21255 | Not Available | Negative | 4735244 - 4735978 | 27039.4 |
| hybrid sensor histidine kinase/response regulator | DXC16_21260 | Not Available | Negative | 4736173 - 4740573 | 169197.0 |
| pectin esterase | DXC16_21265 | Not Available | Negative | 4740769 - 4742493 | 63984.5 |
| hypothetical protein | DXC16_21270 | Not Available | Negative | 4742500 - 4743660 | 43464.3 |
| pectate lyase | DXC16_21275 | Not Available | Negative | 4743681 - 4745294 | 61375.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

