Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_21180 | Not Available | Negative | 4715189 - 4715284 | 3305.9 |
| cardiolipin synthase | DXC16_21185 | Not Available | Positive | 4715654 - 4716949 | 49717.2 |
| methylenetetrahydrofolate reductase | DXC16_21190 | Not Available | Positive | 4717305 - 4718258 | 36210.4 |
| dna polymerase iii subunit delta | DXC16_21195 | Not Available | Positive | 4718286 - 4719410 | 43533.9 |
| hypothetical protein | DXC16_21200 | Not Available | Positive | 4719500 - 4721014 | 57743.0 |
| gliding motility lipoprotein gldh | DXC16_21205 | Not Available | Positive | 4720977 - 4721474 | 18762.5 |
| rod shape-determining protein roda | DXC16_21210 | Not Available | Negative | 4721478 - 4722932 | 54268.6 |
| penicillin-binding protein 2 | DXC16_21215 | Not Available | Negative | 4722913 - 4724763 | 69195.5 |
| rod shape-determining protein mred | DXC16_21220 | Not Available | Negative | 4724763 - 4725263 | 18956.0 |
| rod shape-determining protein mrec | DXC16_21225 | Not Available | Negative | 4725272 - 4726120 | 31395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

