Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4701407 - 4701482 | Not Available |
| glutamine synthetase | DXC16_21135 | Not Available | Negative | 4701603 - 4703105 | 56034.0 |
| gnat family n-acetyltransferase | DXC16_21140 | Not Available | Positive | 4703311 - 4704843 | 59358.0 |
| pas domain-containing protein | DXC16_21145 | Not Available | Negative | 4704970 - 4706292 | 50256.6 |
| sigma-54-dependent fis family transcriptional regulator | DXC16_21150 | Not Available | Negative | 4706298 - 4707629 | 50256.9 |
| tolc family protein | DXC16_21155 | Not Available | Positive | 4707961 - 4709268 | 50664.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXC16_21160 | Not Available | Positive | 4709274 - 4710524 | 47799.6 |
| abc transporter atp-binding protein | DXC16_21165 | Not Available | Positive | 4710540 - 4711250 | 26379.0 |
| abc transporter permease | DXC16_21170 | Not Available | Positive | 4711250 - 4713670 | 91849.4 |
| hypothetical protein | DXC16_21175 | Not Available | Negative | 4714895 - 4715146 | 9778.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

