Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | DXC16_21030 | Not Available | Positive | 4684581 - 4685891 | 50297.2 |
| ribose-phosphate pyrophosphokinase | DXC16_21035 | Not Available | Negative | 4686021 - 4686959 | 34190.5 |
| thiamine phosphate synthase | DXC16_21040 | Not Available | Negative | 4687124 - 4687732 | 22934.7 |
| hypothetical protein | DXC16_21045 | Not Available | Positive | 4687952 - 4688305 | 12947.3 |
| glutathionylspermidine synthase family protein | DXC16_21050 | Not Available | Positive | 4688318 - 4689442 | 43012.5 |
| hesa/moeb/thif family protein | DXC16_21055 | Not Available | Negative | 4689555 - 4690289 | 27033.8 |
| 2-iminoacetate synthase thih | DXC16_21060 | Not Available | Negative | 4690327 - 4691457 | 43251.8 |
| flavodoxin family protein | DXC16_21065 | Not Available | Negative | 4691546 - 4692118 | 21328.5 |
| hypothetical protein | DXC16_21070 | Not Available | Negative | 4692118 - 4692633 | 19574.8 |
| phosphomethylpyrimidine synthase thic | DXC16_21075 | Not Available | Negative | 4692655 - 4694355 | 63475.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

