Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_20975 | Not Available | Negative | 4672270 - 4672854 | 20936.8 |
| hypothetical protein | DXC16_20980 | Not Available | Negative | 4672875 - 4674449 | 58494.8 |
| duf4876 domain-containing protein | DXC16_20985 | Not Available | Negative | 4674464 - 4675678 | 44704.4 |
| tonb-dependent receptor | DXC16_20990 | Not Available | Negative | 4675700 - 4678435 | 103962.0 |
| hypothetical protein | DXC16_20995 | Not Available | Positive | 4678894 - 4679181 | 11068.8 |
| hypothetical protein | DXC16_21000 | Not Available | Positive | 4679281 - 4679643 | 13994.2 |
| ahpc/tsa family protein | DXC16_21005 | Not Available | Negative | 4679950 - 4681041 | 40190.0 |
| polyamine abc transporter atp-binding protein | DXC16_21015 | Not Available | Positive | 4681570 - 4682958 | 51886.3 |
| abc transporter permease | DXC16_21020 | Not Available | Positive | 4682995 - 4683768 | 28468.5 |
| abc transporter permease | DXC16_21025 | Not Available | Positive | 4683762 - 4684553 | 28734.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

