Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_20815 | Not Available | Positive | 4650537 - 4652336 | 70328.3 |
| hypothetical protein | DXC16_20820 | Not Available | Positive | 4652747 - 4653106 | 14036.7 |
| hypothetical protein | DXC16_20825 | Not Available | Positive | 4653106 - 4653612 | 20024.8 |
| hypothetical protein | DXC16_20830 | Not Available | Positive | 4653947 - 4654150 | 8101.99 |
| winged helix-turn-helix transcriptional regulator | DXC16_20835 | Not Available | Positive | 4654113 - 4654754 | 24993.2 |
| duf3871 family protein | DXC16_20845 | Not Available | Positive | 4655239 - 4656258 | 38649.2 |
| hypothetical protein | DXC16_20850 | Not Available | Positive | 4656348 - 4656623 | 10967.0 |
| dna repair protein | DXC16_20855 | Not Available | Positive | 4656665 - 4657126 | 17257.7 |
| site-specific integrase | DXC16_20860 | Not Available | Positive | 4657277 - 4657864 | 22548.8 |
| hypothetical protein | DXC16_20865 | Not Available | Positive | 4658506 - 4658946 | 17248.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

