Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain OM08-13BH
Accession NumberQSTG00000000.1
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_00540 | Not Available | - | 109105 - 109740 | 23460.4 |
| Dna-binding protein | DXC16_00545 | Not Available | - | 109915 - 110280 | 13584.5 |
| Duf2136 superfamily protein | DXC16_00550 | Not Available | - | 110285 - 110578 | 11467.8 |
| hypothetical protein | DXC16_00555 | Not Available | - | 110836 - 111360 | 20405.6 |
| Lambda repressor-like dna-binding domain protein | DXC16_00560 | Not Available | - | 111357 - 111635 | 9710.8 |
| Hypothetical protein | DXC16_00565 | Not Available | + | 111810 - 112136 | 12637.5 |
| hypothetical protein | DXC16_00570 | Not Available | + | 112184 - 112429 | 9346.53 |
| Hnh endonuclease | DXC16_00575 | Not Available | + | 112510 - 113088 | 22381.1 |
| Phage portal protein | DXC16_00580 | Not Available | - | 113089 - 114567 | 56903.3 |
| Trna-gln; | Not Available | Not Available | + | 113617 - 113687 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
