Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-tyrosyl-trna(tyr) deacylase | DXC16_20715 | Not Available | Positive | 4630722 - 4631174 | 16476.0 |
| pyrophosphatase | DXC16_20720 | Not Available | Positive | 4631174 - 4631494 | 12338.7 |
| deoxyribose-phosphate aldolase | DXC16_20725 | Not Available | Positive | 4631501 - 4632448 | 34798.2 |
| polyprenyl synthetase family protein | DXC16_20730 | Not Available | Negative | 4632639 - 4633613 | 36285.5 |
| dna polymerase i | DXC16_20735 | Not Available | Positive | 4633705 - 4636620 | 109277.0 |
| hypothetical protein | DXC16_20740 | Not Available | Positive | 4636691 - 4636903 | 8048.06 |
| duf3836 domain-containing protein | DXC16_20745 | Not Available | Positive | 4636930 - 4637316 | 15047.1 |
| redox-regulated atpase ychf | DXC16_20750 | Not Available | Positive | 4637518 - 4638621 | 40815.9 |
| ketopantoate reductase family protein | DXC16_20755 | Not Available | Positive | 4638746 - 4639657 | 33089.2 |
| prolipoprotein diacylglyceryl transferase | DXC16_20760 | Not Available | Positive | 4639654 - 4640475 | 31477.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

