Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_20655 | Not Available | Negative | 4621006 - 4621200 | 7400.14 |
| sigma-70 family rna polymerase sigma factor | DXC16_20665 | Not Available | Negative | 4621856 - 4622416 | 22170.5 |
| hypothetical protein | DXC16_20670 | Not Available | Positive | 4622442 - 4622633 | 7337.9 |
| kila-n domain-containing protein | DXC16_20680 | Not Available | Negative | 4623123 - 4623926 | 30740.0 |
| hypothetical protein | DXC16_20685 | Not Available | Negative | 4623893 - 4624435 | 21245.2 |
| site-specific integrase | DXC16_20690 | Not Available | Negative | 4624420 - 4625655 | 47320.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DXC16_20695 | Not Available | Positive | 4626059 - 4627930 | 69589.1 |
| adenine phosphoribosyltransferase | DXC16_20700 | Not Available | Positive | 4627990 - 4628514 | 19189.4 |
| hypothetical protein | DXC16_20705 | Not Available | Negative | 4628517 - 4628741 | 8505.38 |
| excinuclease abc subunit uvrc | DXC16_20710 | Not Available | Positive | 4628744 - 4630564 | 69888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

