Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 2 protein | DXC16_20550 | Not Available | Positive | 4599760 - 4600719 | 37811.5 |
| xre family transcriptional regulator | DXC16_20560 | Not Available | Positive | 4601043 - 4601243 | 7447.34 |
| dna methyltransferase | DXC16_20565 | Not Available | Positive | 4601248 - 4602393 | 44154.6 |
| hypothetical protein | DXC16_20570 | Not Available | Negative | 4602398 - 4602604 | 8006.97 |
| hypothetical protein | DXC16_20575 | Not Available | Positive | 4602801 - 4603652 | 32639.9 |
| duf262 domain-containing protein | DXC16_20580 | Not Available | Positive | 4603675 - 4604847 | 44925.2 |
| site-specific integrase | DXC16_20585 | Not Available | Positive | 4604894 - 4605817 | 35357.1 |
| mobilization protein | DXC16_20590 | Not Available | Negative | 4605886 - 4607172 | 49619.7 |
| site-specific integrase | DXC16_20595 | Not Available | Negative | 4607494 - 4608708 | 46398.4 |
| hypothetical protein | DXC16_20600 | Not Available | Negative | 4608869 - 4609624 | 28194.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

