Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DXC16_20450 | Not Available | Positive | 4578739 - 4579677 | 35502.6 |
| hybrid sensor histidine kinase/response regulator | DXC16_20455 | Not Available | Positive | 4579687 - 4580826 | 42228.6 |
| endonuclease | DXC16_20460 | Not Available | Negative | 4580831 - 4581892 | 40748.7 |
| response regulator | DXC16_20465 | Not Available | Negative | 4581896 - 4583746 | 71131.3 |
| response regulator | DXC16_20470 | Not Available | Positive | 4583890 - 4584246 | 13485.5 |
| glycosyltransferase family 2 protein | DXC16_20475 | Not Available | Negative | 4584250 - 4585455 | 46029.0 |
| glycosyltransferase family 1 protein | DXC16_20480 | Not Available | Negative | 4585452 - 4586570 | 42816.1 |
| glycosyltransferase family 2 protein | DXC16_20485 | Not Available | Negative | 4586577 - 4587419 | 32096.4 |
| sam-dependent methyltransferase | DXC16_20490 | Not Available | Negative | 4587403 - 4588185 | 31177.3 |
| glycosyltransferase family 4 protein | DXC16_20495 | Not Available | Negative | 4588182 - 4589381 | 46006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

