Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4954 family protein | DXC16_20400 | Not Available | Positive | 4567860 - 4569845 | 74478.4 |
| hsp20/alpha crystallin family protein | DXC16_20405 | Not Available | Negative | 4569978 - 4570421 | 16943.0 |
| hypothetical protein | DXC16_20410 | Not Available | Negative | 4570686 - 4571144 | 17637.3 |
| linear amide c-n hydrolase | DXC16_20415 | Not Available | Negative | 4571379 - 4572437 | 39419.4 |
| hypothetical protein | DXC16_20420 | Not Available | Negative | 4572596 - 4572835 | 9468.92 |
| hpaii family restriction endonuclease | DXC16_20425 | Not Available | Positive | 4572938 - 4574026 | 41342.9 |
| alpha-amylase | DXC16_20430 | Not Available | Negative | 4574155 - 4575852 | 64741.7 |
| phospholipase | DXC16_20435 | Not Available | Negative | 4575869 - 4576654 | 29317.4 |
| [acyl-carrier-protein] s-malonyltransferase | DXC16_20440 | Not Available | Negative | 4576780 - 4577667 | 31271.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DXC16_20445 | Not Available | Negative | 4577794 - 4578618 | 29140.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

