Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_20300 | Not Available | Positive | 4546713 - 4546928 | 8370.96 |
| site-specific integrase | DXC16_20305 | Not Available | Positive | 4546885 - 4548003 | 43461.9 |
| hypothetical protein | DXC16_20310 | Not Available | Negative | 4548067 - 4548258 | 7706.83 |
| transposase | DXC16_20315 | Not Available | Positive | 4548232 - 4549062 | 32295.9 |
| helix-turn-helix domain-containing protein | DXC16_20320 | Not Available | Positive | 4549272 - 4549646 | 14207.9 |
| helicase | DXC16_20325 | Not Available | Positive | 4549652 - 4550800 | 42624.8 |
| hypothetical protein | DXC16_20330 | Not Available | Positive | 4550797 - 4550985 | 6782.09 |
| hypothetical protein | DXC16_20335 | Not Available | Positive | 4550982 - 4552094 | 42195.2 |
| mobilization protein | DXC16_20340 | Not Available | Positive | 4552288 - 4553838 | 60053.2 |
| hypothetical protein | DXC16_20345 | Not Available | Negative | 4553892 - 4554659 | 28423.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

