Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | DXC16_20190 | Not Available | Positive | 4518310 - 4518996 | 25487.5 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | DXC16_20195 | Not Available | Positive | 4519031 - 4520989 | 72651.5 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | DXC16_20200 | Not Available | Positive | 4521010 - 4521765 | 27317.2 |
| arac family transcriptional regulator | DXC16_20205 | Not Available | Negative | 4521830 - 4522690 | 33227.9 |
| fimbrillin family protein | DXC16_20215 | Not Available | Negative | 4523197 - 4524186 | 35806.3 |
| duf5119 domain-containing protein | DXC16_20220 | Not Available | Negative | 4524235 - 4525230 | 36296.9 |
| duf3575 domain-containing protein | DXC16_20225 | Not Available | Negative | 4525197 - 4526564 | 52080.2 |
| glycoside hydrolase family 29 | DXC16_20235 | Not Available | Positive | 4527159 - 4529042 | 70662.0 |
| dna-protecting protein dpra | DXC16_20240 | Not Available | Negative | 4529123 - 4530238 | 40940.4 |
| acyl-coa thioesterase | DXC16_20245 | Not Available | Negative | 4530235 - 4530642 | 15657.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

