Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_20140 | Not Available | Positive | 4503570 - 4506497 | 106643.0 |
| hypothetical protein | DXC16_20145 | Not Available | Positive | 4506586 - 4507107 | 19971.1 |
| tonb-dependent receptor | DXC16_20150 | Not Available | Positive | 4507432 - 4510200 | 104227.0 |
| acid phosphatase | DXC16_20155 | Not Available | Positive | 4510211 - 4511182 | 37239.9 |
| sodium:calcium antiporter | DXC16_20160 | Not Available | Positive | 4511246 - 4512208 | 33528.8 |
| n-acetyltransferase | DXC16_20165 | Not Available | Positive | 4512283 - 4513419 | 43814.1 |
| type iia dna topoisomerase subunit b | DXC16_20170 | Not Available | Positive | 4513450 - 4515327 | 70989.7 |
| phosphopantetheine adenylyltransferase | DXC16_20175 | Not Available | Positive | 4515345 - 4515800 | 17350.0 |
| s41 family peptidase | DXC16_20180 | Not Available | Positive | 4515803 - 4517404 | 60797.7 |
| phosphatase pap2 family protein | DXC16_20185 | Not Available | Negative | 4517508 - 4518119 | 22003.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

