Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | DXC16_20085 | Not Available | Negative | 4492949 - 4493086 | 5388.52 |
| flotillin family protein | DXC16_20095 | Not Available | Negative | 4494271 - 4495971 | 62444.3 |
| hypothetical protein | DXC16_20100 | Not Available | Negative | 4495997 - 4496530 | 20290.5 |
| rrna maturation rnase ybey | DXC16_20105 | Not Available | Negative | 4496757 - 4497173 | 15837.9 |
| hypothetical protein | DXC16_20110 | Not Available | Negative | 4497219 - 4498451 | 44161.1 |
| hypothetical protein | DXC16_20115 | Not Available | Positive | 4498968 - 4499225 | 9707.39 |
| hypothetical protein | DXC16_20120 | Not Available | Negative | 4499256 - 4500053 | 29151.1 |
| murein l,d-transpeptidase | DXC16_20125 | Not Available | Negative | 4500056 - 4501075 | 38970.9 |
| site-specific integrase | DXC16_20130 | Not Available | Positive | 4501283 - 4502221 | 36160.6 |
| arac family transcriptional regulator | DXC16_20135 | Not Available | Positive | 4503031 - 4503525 | 19249.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

