Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonucleotide-diphosphate reductase subunit alpha | DXC16_19960 | Not Available | Positive | 4471703 - 4472284 | 22158.8 |
| hypothetical protein | DXC16_19970 | Not Available | Negative | 4472995 - 4473207 | 7845.32 |
| metallophosphoesterase | DXC16_19980 | Not Available | Negative | 4473710 - 4474522 | 31598.4 |
| nucleotidyl transferase abieii/abigii toxin family protein | DXC16_19985 | Not Available | Negative | 4474515 - 4475390 | 33941.6 |
| hypothetical protein | DXC16_19990 | Not Available | Negative | 4475387 - 4475950 | 21346.2 |
| dna alkylation repair protein | DXC16_19995 | Not Available | Negative | 4476168 - 4476848 | 26762.5 |
| pyridoxamine 5'-phosphate oxidase family protein | DXC16_20000 | Not Available | Negative | 4476894 - 4477409 | 19131.9 |
| hypothetical protein | DXC16_20005 | Not Available | Negative | 4477412 - 4478080 | 25951.9 |
| flavin oxidoreductase | DXC16_20010 | Not Available | Negative | 4478092 - 4478655 | 20856.2 |
| duf1294 domain-containing protein | DXC16_20015 | Not Available | Negative | 4478676 - 4478954 | 10659.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

