Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_19865 | Not Available | Positive | 4462070 - 4462651 | 22648.9 |
| para family protein | DXC16_19870 | Not Available | Positive | 4462799 - 4463590 | 29090.7 |
| hypothetical protein | DXC16_19875 | Not Available | Positive | 4463596 - 4463940 | 13051.7 |
| hypothetical protein | DXC16_19880 | Not Available | Positive | 4464067 - 4464567 | 18664.5 |
| single-stranded dna-binding protein | DXC16_19885 | Not Available | Positive | 4465329 - 4465706 | 14227.7 |
| xre family transcriptional regulator | DXC16_19890 | Not Available | Positive | 4465933 - 4466241 | 11646.2 |
| type ii toxin-antitoxin system hipa family toxin | DXC16_19895 | Not Available | Positive | 4466241 - 4467731 | 56540.4 |
| Trna-ser | Not Available | Not Available | Positive | 4467988 - 4468072 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4468079 - 4468156 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 4468161 - 4468249 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

