Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_19790 | Not Available | Negative | 4448634 - 4449029 | 14291.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXC16_19795 | Not Available | Negative | 4449224 - 4450381 | 42540.1 |
| ompa family protein | DXC16_19800 | Not Available | Negative | 4450402 - 4451628 | 46727.4 |
| hypothetical protein | DXC16_19805 | Not Available | Negative | 4451657 - 4452841 | 44311.1 |
| group ii intron reverse transcriptase/maturase | DXC16_19810 | Not Available | Positive | 4454098 - 4455744 | 63557.3 |
| serine/threonine protein phosphatase | DXC16_19820 | Not Available | Negative | 4455978 - 4456739 | 29475.6 |
| hypothetical protein | DXC16_19825 | Not Available | Negative | 4456736 - 4457521 | 29701.3 |
| hypothetical protein | DXC16_19830 | Not Available | Negative | 4457509 - 4458480 | 36937.0 |
| hypothetical protein | DXC16_19835 | Not Available | Positive | 4458893 - 4459366 | 18086.9 |
| hypothetical protein | DXC16_19860 | Not Available | Positive | 4461701 - 4462051 | 13835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

