Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit i | DXC16_01660 | Not Available | Negative | 355102 - 355554 | 16944.7 |
| nadh-quinone oxidoreductase subunit h | DXC16_01665 | Not Available | Negative | 355554 - 356630 | 40265.7 |
| nadh-quinone oxidoreductase subunit c/d | DXC16_01670 | Not Available | Negative | 356754 - 358313 | 59743.6 |
| nadh-quinone oxidoreductase subunit b | DXC16_01675 | Not Available | Negative | 358310 - 358906 | 22081.9 |
| nadh-quinone oxidoreductase subunit a | DXC16_01680 | Not Available | Negative | 358897 - 359247 | 13099.5 |
| hypothetical protein | DXC16_01685 | Not Available | Negative | 359351 - 359728 | 14644.8 |
| trkh family potassium uptake protein | DXC16_01690 | Not Available | Negative | 359831 - 361285 | 53448.3 |
| trk system potassium transporter trka | DXC16_01695 | Not Available | Negative | 361285 - 362625 | 49307.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DXC16_01700 | Not Available | Negative | 362638 - 364536 | 70224.9 |
| gscfa domain protein | DXC16_01705 | Not Available | Positive | 364629 - 365615 | 38641.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

