Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | DXC16_19530 | Not Available | Positive | 4391288 - 4392475 | 44190.9 |
| dmt family transporter | DXC16_19535 | Not Available | Positive | 4392563 - 4393450 | 31747.7 |
| abc transporter permease | DXC16_19540 | Not Available | Negative | 4393458 - 4395809 | 89911.1 |
| abc transporter atp-binding protein | DXC16_19545 | Not Available | Negative | 4395869 - 4396543 | 24767.0 |
| abc transporter permease | DXC16_19550 | Not Available | Negative | 4396563 - 4398962 | 91452.7 |
| abc transporter permease | DXC16_19555 | Not Available | Negative | 4398983 - 4401352 | 90041.8 |
| abc transporter permease | DXC16_19560 | Not Available | Negative | 4401366 - 4403762 | 92748.7 |
| hlyd family efflux transporter periplasmic adaptor subunit | DXC16_19565 | Not Available | Negative | 4403773 - 4405023 | 48108.4 |
| tolc family protein | DXC16_19570 | Not Available | Negative | 4405107 - 4406576 | 55871.3 |
| sel1 repeat family protein | DXC16_19575 | Not Available | Negative | 4406626 - 4407549 | 34904.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

