Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_19480 | Not Available | Positive | 4379775 - 4379978 | 7494.07 |
| dead/deah box helicase | DXC16_19485 | Not Available | Negative | 4380172 - 4381449 | 47461.1 |
| phosphoserine phosphatase serb | DXC16_19490 | Not Available | Negative | 4381470 - 4382702 | 46069.1 |
| hypothetical protein | DXC16_19495 | Not Available | Positive | 4382975 - 4383469 | 18385.1 |
| had family phosphatase | DXC16_19500 | Not Available | Positive | 4383628 - 4384248 | 23389.8 |
| yjgp/yjgq family permease | DXC16_19505 | Not Available | Negative | 4384249 - 4385421 | 45473.9 |
| trna guanosine(34) transglycosylase tgt | DXC16_19510 | Not Available | Negative | 4385432 - 4386562 | 42665.6 |
| endopeptidase la | DXC16_19515 | Not Available | Negative | 4386565 - 4389042 | 92665.5 |
| trna (adenosine(37)-n6)-methyltransferase trmm | DXC16_19520 | Not Available | Positive | 4389224 - 4389928 | 26207.4 |
| diacylglycerol kinase family lipid kinase | DXC16_19525 | Not Available | Negative | 4390009 - 4391043 | 38141.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

