Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq | DXC16_19210 | Not Available | Negative | 4329155 - 4329892 | 27832.3 |
| udp-n-acetylmuramate--l-alanine ligase | DXC16_19215 | Not Available | Negative | 4329889 - 4331265 | 51104.2 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferase | DXC16_19220 | Not Available | Negative | 4331255 - 4332385 | 40466.6 |
| ftsw/roda/spove family cell cycle protein | DXC16_19225 | Not Available | Negative | 4332450 - 4333847 | 51362.1 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DXC16_19230 | Not Available | Negative | 4333871 - 4335205 | 49945.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DXC16_19235 | Not Available | Negative | 4335220 - 4336488 | 47029.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DXC16_19240 | Not Available | Negative | 4336501 - 4337955 | 53286.2 |
| pasta domain-containing protein | DXC16_19245 | Not Available | Negative | 4337974 - 4340154 | 80327.6 |
| hypothetical protein | DXC16_19250 | Not Available | Negative | 4340159 - 4340533 | 14479.4 |
| ribosomal rna small subunit methyltransferase h | DXC16_19255 | Not Available | Negative | 4340538 - 4341452 | 34391.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

