Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DXC16_01600 | Not Available | Negative | 336143 - 337861 | 64244.0 |
| hybrid sensor histidine kinase/response regulator | DXC16_01610 | Not Available | Positive | 341217 - 345689 | 171738.0 |
| glycoside hydrolase family 28 protein | DXC16_01615 | Not Available | Negative | 345767 - 347173 | 52387.7 |
| atp-binding protein | DXC16_01625 | Not Available | Positive | 347608 - 347850 | 8923.97 |
| glucuronyl hydrolase | DXC16_01630 | Not Available | Negative | 347852 - 349078 | 46657.1 |
| nadh-quinone oxidoreductase subunit n | DXC16_01635 | Not Available | Negative | 349254 - 350798 | 56882.0 |
| nadh-quinone oxidoreductase subunit m | DXC16_01640 | Not Available | Negative | 350830 - 352311 | 53794.6 |
| nadh-quinone oxidoreductase subunit l | DXC16_01645 | Not Available | Negative | 352365 - 354266 | 70328.2 |
| nadh-quinone oxidoreductase subunit nuok | DXC16_01650 | Not Available | Negative | 354269 - 354577 | 11758.6 |
| nadh-quinone oxidoreductase subunit j | DXC16_01655 | Not Available | Negative | 354583 - 355086 | 18224.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

