Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose/proton symporter rhat | DXC16_19160 | Not Available | Positive | 4316646 - 4317665 | 36101.1 |
| rhamnulose-1-phosphate aldolase | DXC16_19165 | Not Available | Positive | 4317751 - 4318560 | 30253.7 |
| duf4251 domain-containing protein | DXC16_19170 | Not Available | Positive | 4318769 - 4319266 | 18510.1 |
| arac family transcriptional regulator | DXC16_19175 | Not Available | Positive | 4319397 - 4320317 | 35143.8 |
| lytic transglycosylase domain-containing protein | DXC16_19180 | Not Available | Positive | 4320325 - 4321323 | 37375.8 |
| ion transporter | DXC16_19185 | Not Available | Negative | 4321349 - 4322206 | 32682.8 |
| duf4981 domain-containing protein | DXC16_19190 | Not Available | Positive | 4322322 - 4325417 | 117603.0 |
| gatb/yqey domain-containing protein | DXC16_19195 | Not Available | Negative | 4325836 - 4326285 | 15932.5 |
| cell division protein ftsz | DXC16_19200 | Not Available | Negative | 4326307 - 4327611 | 47936.9 |
| cell division protein ftsa | DXC16_19205 | Not Available | Negative | 4327649 - 4329151 | 54983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

