Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_19110 | Not Available | Positive | 4306742 - 4306972 | 9100.76 |
| arac family transcriptional regulator | DXC16_19115 | Not Available | Negative | 4306965 - 4307855 | 34355.3 |
| pyrroline-5-carboxylate reductase | DXC16_19120 | Not Available | Negative | 4308038 - 4308811 | 27247.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DXC16_19125 | Not Available | Negative | 4308995 - 4310119 | 40994.8 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DXC16_19130 | Not Available | Negative | 4310133 - 4311101 | 36000.4 |
| argininosuccinate synthase | DXC16_19135 | Not Available | Negative | 4311107 - 4312315 | 45126.7 |
| n-acetyltransferase | DXC16_19140 | Not Available | Negative | 4312416 - 4312973 | 20661.0 |
| arginine repressor | DXC16_19145 | Not Available | Negative | 4312996 - 4313472 | 17529.3 |
| rhamnulokinase | DXC16_19150 | Not Available | Positive | 4313779 - 4315257 | 55006.8 |
| l-rhamnose isomerase | DXC16_19155 | Not Available | Positive | 4315297 - 4316553 | 47536.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

