Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | DXC16_19005 | Not Available | Negative | 4273731 - 4274507 | 29020.2 |
| tonb-dependent receptor | DXC16_19010 | Not Available | Negative | 4274535 - 4277738 | 118624.0 |
| lactaldehyde reductase | DXC16_19015 | Not Available | Negative | 4277941 - 4279095 | 40917.7 |
| helicase | DXC16_19020 | Not Available | Negative | 4279309 - 4280565 | 48849.9 |
| hypothetical protein | DXC16_19025 | Not Available | Positive | 4280656 - 4280841 | 7029.46 |
| susc/raga family tonb-linked outer membrane protein | DXC16_19030 | Not Available | Positive | 4280879 - 4283749 | 105264.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DXC16_19035 | Not Available | Positive | 4283771 - 4285741 | 74011.3 |
| hypothetical protein | DXC16_19040 | Not Available | Negative | 4286055 - 4286519 | 17273.6 |
| acetyl-coa synthetase | DXC16_19045 | Not Available | Negative | 4286564 - 4288216 | 62326.4 |
| cupin domain-containing protein | DXC16_19050 | Not Available | Negative | 4288300 - 4288854 | 20522.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

