Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DXC16_18750 | Not Available | Negative | 4206662 - 4207090 | 16199.1 |
| metal abc transporter permease | DXC16_18755 | Not Available | Negative | 4207074 - 4207925 | 31184.2 |
| phospholipase | DXC16_18760 | Not Available | Negative | 4207978 - 4208397 | 15918.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DXC16_18765 | Not Available | Negative | 4208402 - 4209628 | 45914.5 |
| class i fructose-bisphosphate aldolase | DXC16_18770 | Not Available | Negative | 4209790 - 4210842 | 38037.4 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DXC16_18775 | Not Available | Negative | 4210993 - 4211754 | 29086.8 |
| adp-ribosylglycohydrolase | DXC16_18780 | Not Available | Positive | 4211918 - 4212706 | 29919.8 |
| dna polymerase iv | DXC16_18785 | Not Available | Negative | 4212687 - 4213781 | 41305.8 |
| Trna-pro | Not Available | Not Available | Positive | 4214043 - 4214120 | Not Available |
| site-specific integrase | DXC16_18795 | Not Available | Positive | 4214643 - 4215887 | 48495.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

