Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_18700 | Not Available | Positive | 4197376 - 4197609 | 9401.63 |
| nucleoside deaminase | DXC16_18705 | Not Available | Positive | 4197611 - 4198045 | 15697.1 |
| duf4834 family protein | DXC16_18710 | Not Available | Negative | 4198049 - 4198351 | 11555.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | DXC16_18715 | Not Available | Negative | 4198404 - 4199111 | 26073.4 |
| phosphatidylserine decarboxylase proenzyme | DXC16_18720 | Not Available | Negative | 4199123 - 4199809 | 25956.1 |
| dna polymerase iii subunit alpha | DXC16_18725 | Not Available | Positive | 4200001 - 4203798 | 143977.0 |
| thioredoxin | DXC16_18730 | Not Available | Positive | 4203840 - 4204154 | 11454.8 |
| hypothetical protein | DXC16_18735 | Not Available | Positive | 4204190 - 4204525 | 12878.8 |
| plasmid pria4b orf-3 family protein | DXC16_18740 | Not Available | Positive | 4204705 - 4206264 | 61127.4 |
| hypothetical protein | DXC16_18745 | Not Available | Negative | 4206379 - 4206600 | 8312.45 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

