Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DXC16_01545 | Not Available | Positive | 319656 - 320852 | 43166.3 |
| dna repair protein recn | DXC16_01550 | Not Available | Positive | 320968 - 322629 | 62006.0 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DXC16_01555 | Not Available | Positive | 322680 - 323447 | 28167.3 |
| tetratricopeptide repeat protein | DXC16_01560 | Not Available | Positive | 323484 - 325184 | 62540.1 |
| trna lysidine(34) synthetase tils | DXC16_01565 | Not Available | Negative | 325323 - 326627 | 50090.6 |
| ferrous iron transport protein b | DXC16_01570 | Not Available | Positive | 326748 - 329216 | 92758.5 |
| Trna-cys | Not Available | Not Available | Positive | 329530 - 329604 | Not Available |
| alpha-l-fucosidase | DXC16_01580 | Not Available | Negative | 329915 - 331240 | 50388.9 |
| gtp-binding protein | DXC16_01585 | Not Available | Positive | 331389 - 332639 | 47715.0 |
| beta-xylosidase | DXC16_01595 | Not Available | Negative | 333259 - 336126 | 108252.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

