Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | DXC16_18650 | Not Available | Positive | 4184659 - 4185177 | 19478.5 |
| duf4450 domain-containing protein | DXC16_18655 | Not Available | Negative | 4185200 - 4188457 | 121512.0 |
| hypothetical protein | DXC16_18660 | Not Available | Negative | 4188482 - 4190590 | 79995.1 |
| glycoside hydrolase family 88 protein | DXC16_18665 | Not Available | Negative | 4190645 - 4191883 | 47145.2 |
| ump kinase | DXC16_18670 | Not Available | Negative | 4192141 - 4192851 | 25575.2 |
| mate family efflux transporter | DXC16_18675 | Not Available | Negative | 4192890 - 4194215 | 48955.7 |
| peptidase s41 | DXC16_18680 | Not Available | Positive | 4194374 - 4195813 | 54094.4 |
| biotin--[acetyl-coa-carboxylase] ligase | DXC16_18685 | Not Available | Negative | 4195810 - 4196577 | 29183.9 |
| mmcq/yjbr family dna-binding protein | DXC16_18690 | Not Available | Negative | 4196561 - 4196917 | 13937.7 |
| yran family protein | DXC16_18695 | Not Available | Negative | 4196935 - 4197300 | 14153.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

