Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_18540 | Not Available | Negative | 4157647 - 4158030 | 14845.0 |
| upxy family transcription antiterminator | DXC16_18545 | Not Available | Negative | 4158113 - 4158661 | 21158.1 |
| duf2442 domain-containing protein | DXC16_18555 | Not Available | Negative | 4159655 - 4160071 | 16026.2 |
| duf3791 domain-containing protein | DXC16_18560 | Not Available | Positive | 4160382 - 4160810 | 15954.4 |
| duf3990 domain-containing protein | DXC16_18565 | Not Available | Positive | 4160807 - 4161280 | 18414.9 |
| hypothetical protein | DXC16_18570 | Not Available | Positive | 4161277 - 4161504 | 8602.18 |
| glutathione peroxidase | DXC16_18575 | Not Available | Negative | 4161535 - 4162074 | 20146.2 |
| sigma-54-dependent fis family transcriptional regulator | DXC16_18580 | Not Available | Positive | 4162192 - 4163532 | 50137.7 |
| atp-binding protein | DXC16_18585 | Not Available | Positive | 4163648 - 4164949 | 48986.9 |
| atp-dependent helicase | DXC16_18590 | Not Available | Positive | 4165030 - 4168206 | 122633.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

