Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_18485 | Not Available | Positive | 4147630 - 4147860 | 9075.28 |
| glycosyltransferase | DXC16_18490 | Not Available | Negative | 4147764 - 4148477 | 27581.0 |
| glycosyltransferase | DXC16_18495 | Not Available | Negative | 4148509 - 4149681 | 45303.8 |
| polysaccharide pyruvyl transferase family protein | DXC16_18500 | Not Available | Negative | 4149698 - 4150711 | 38728.4 |
| glycosyltransferase family 4 protein | DXC16_18505 | Not Available | Negative | 4150764 - 4151873 | 42339.2 |
| glycosyltransferase family 2 protein | DXC16_18510 | Not Available | Negative | 4151873 - 4152748 | 34289.9 |
| o-antigen ligase domain-containing protein | DXC16_18515 | Not Available | Negative | 4152748 - 4154007 | 48896.8 |
| alpha-1,2-fucosyltransferase | DXC16_18520 | Not Available | Negative | 4154019 - 4154810 | 31410.3 |
| glycosyltransferase | DXC16_18525 | Not Available | Negative | 4154818 - 4155633 | 31005.6 |
| hypothetical protein | DXC16_18530 | Not Available | Negative | 4155647 - 4157014 | 51177.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

