Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | DXC16_18435 | Not Available | Negative | 4131425 - 4132336 | 34224.1 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DXC16_18440 | Not Available | Positive | 4132574 - 4134430 | 68719.0 |
| hypothetical protein | DXC16_18445 | Not Available | Positive | 4134707 - 4135144 | 17467.4 |
| abc transporter permease | DXC16_18450 | Not Available | Negative | 4135205 - 4137529 | 86932.1 |
| abc transporter permease | DXC16_18455 | Not Available | Negative | 4137544 - 4139856 | 87510.2 |
| abc transporter atp-binding protein | DXC16_18460 | Not Available | Negative | 4139876 - 4140550 | 24853.2 |
| abc transporter permease | DXC16_18465 | Not Available | Negative | 4140585 - 4142894 | 86414.7 |
| m3 family peptidase | DXC16_18470 | Not Available | Positive | 4143216 - 4145321 | 79164.9 |
| acyltransferase | DXC16_18475 | Not Available | Positive | 4145502 - 4146662 | 44353.2 |
| hypothetical protein | DXC16_18480 | Not Available | Negative | 4146769 - 4147623 | 31763.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

