Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_18220 | Not Available | Positive | 4079305 - 4079805 | 19273.6 |
| hybrid sensor histidine kinase/response regulator | DXC16_18225 | Not Available | Negative | 4080137 - 4082482 | 89699.5 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DXC16_18230 | Not Available | Negative | 4082697 - 4085921 | 119651.0 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit | DXC16_18235 | Not Available | Negative | 4085945 - 4087021 | 39950.5 |
| amidophosphoribosyltransferase | DXC16_18240 | Not Available | Negative | 4087047 - 4088930 | 71311.8 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DXC16_18245 | Not Available | Negative | 4089089 - 4090933 | 67627.3 |
| glutamine synthetase type iii | DXC16_18250 | Not Available | Negative | 4091247 - 4093436 | 82007.6 |
| ammonium transporter | DXC16_18255 | Not Available | Negative | 4093494 - 4094852 | 47652.5 |
| p-ii family nitrogen regulator | DXC16_18260 | Not Available | Negative | 4094928 - 4095284 | 13455.3 |
| hypothetical protein | DXC16_18265 | Not Available | Negative | 4095402 - 4096127 | 25629.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

