Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | DXC16_18170 | Not Available | Positive | 4067770 - 4069575 | 68368.2 |
| peptide chain release factor 2 | DXC16_18175 | Not Available | Positive | 4069633 - 4070748 | 42519.2 |
| cyth domain-containing protein | DXC16_18180 | Not Available | Positive | 4071043 - 4071513 | 18287.6 |
| tonb-dependent receptor | DXC16_18185 | Not Available | Positive | 4071603 - 4074077 | 91599.6 |
| rna polymerase sigma factor | DXC16_18190 | Not Available | Positive | 4074246 - 4074749 | 19779.6 |
| hypothetical protein | DXC16_18195 | Not Available | Negative | 4074830 - 4075216 | 14818.4 |
| sodium-dependent transporter | DXC16_18200 | Not Available | Positive | 4075312 - 4076676 | 49159.4 |
| helix-hairpin-helix domain-containing protein | DXC16_18205 | Not Available | Positive | 4076684 - 4077586 | 35320.7 |
| alkaline phosphatase | DXC16_18210 | Not Available | Negative | 4077583 - 4079001 | 51603.1 |
| hypothetical protein | DXC16_18215 | Not Available | Positive | 4079094 - 4079288 | 7560.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

