Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | DXC16_01495 | Not Available | Positive | 308404 - 309201 | 30147.3 |
| putative transporter | DXC16_01500 | Not Available | Positive | 309278 - 310939 | 59441.0 |
| fructose-bisphosphatase class iii | DXC16_01505 | Not Available | Positive | 310949 - 312949 | 76533.3 |
| aspartate 1-decarboxylase | DXC16_01510 | Not Available | Negative | 313079 - 313429 | 12822.7 |
| pantoate--beta-alanine ligase | DXC16_01515 | Not Available | Negative | 313451 - 314299 | 31339.6 |
| glycogen synthase | DXC16_01520 | Not Available | Positive | 314652 - 315476 | 31933.0 |
| duf4270 domain-containing protein | DXC16_01525 | Not Available | Positive | 315496 - 316926 | 53605.2 |
| duf3127 domain-containing protein | DXC16_01530 | Not Available | Negative | 317176 - 317553 | 13929.4 |
| dna polymerase iii subunit beta | DXC16_01535 | Not Available | Positive | 317707 - 318831 | 41323.5 |
| 3'-5' exonuclease | DXC16_01540 | Not Available | Positive | 318883 - 319659 | 29605.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

