Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | DXC16_18070 | Not Available | Negative | 4042243 - 4044060 | 70441.4 |
| sam-dependent dna methyltransferase | DXC16_18075 | Not Available | Negative | 4044073 - 4045488 | 53061.4 |
| dead/deah box helicase | DXC16_18080 | Not Available | Negative | 4045492 - 4048197 | 102650.0 |
| xre family transcriptional regulator | DXC16_18085 | Not Available | Negative | 4048273 - 4048482 | 7957.81 |
| hypothetical protein | DXC16_18090 | Not Available | Positive | 4048620 - 4049333 | 27119.7 |
| porin family protein | DXC16_18095 | Not Available | Positive | 4049678 - 4050277 | 21550.2 |
| primosomal protein n' | DXC16_18100 | Not Available | Positive | 4050350 - 4052812 | 93875.1 |
| phosphatase | DXC16_18105 | Not Available | Positive | 4052860 - 4053570 | 26532.1 |
| low molecular weight phosphotyrosine protein phosphatase | DXC16_18110 | Not Available | Positive | 4053578 - 4054048 | 17874.5 |
| hdig domain-containing protein | DXC16_18115 | Not Available | Negative | 4054023 - 4056080 | 79191.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

