Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | DXC16_18020 | Not Available | Positive | 4031430 - 4032107 | 25463.2 |
| dna-binding protein | DXC16_18025 | Not Available | Positive | 4032336 - 4032665 | 12798.5 |
| duf3987 domain-containing protein | DXC16_18030 | Not Available | Positive | 4032658 - 4034157 | 56930.5 |
| hypothetical protein | DXC16_18035 | Not Available | Positive | 4034150 - 4035268 | 42118.5 |
| recombinase | DXC16_18040 | Not Available | Positive | 4035418 - 4036965 | 59398.2 |
| restriction endonuclease subunit s | DXC16_18045 | Not Available | Positive | 4037076 - 4038209 | 42685.5 |
| hypothetical protein | DXC16_18050 | Not Available | Negative | 4038204 - 4038752 | 20352.5 |
| integrase | DXC16_18055 | Not Available | Positive | 4038789 - 4039592 | 31537.3 |
| type i restriction endonuclease | DXC16_18060 | Not Available | Negative | 4039623 - 4041083 | 54996.9 |
| duf1016 family protein | DXC16_18065 | Not Available | Negative | 4041089 - 4042246 | 44438.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

