Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fused gamma-glutamyl-gamma-aminobutyrate hydrolase/peptidase | DXC16_17970 | Not Available | Negative | 4020800 - 4022557 | 64886.2 |
| phosphate butyryltransferase | DXC16_17975 | Not Available | Positive | 4022640 - 4023548 | 33285.3 |
| butyrate kinase | DXC16_17980 | Not Available | Positive | 4023647 - 4024711 | 38268.3 |
| helicase | DXC16_17985 | Not Available | Negative | 4024849 - 4026099 | 47981.1 |
| methylmalonyl-coa carboxyltransferase | DXC16_17990 | Not Available | Positive | 4026387 - 4026806 | 15488.7 |
| aminopeptidase | DXC16_17995 | Not Available | Negative | 4026937 - 4028247 | 50768.5 |
| hypothetical protein | DXC16_18000 | Not Available | Positive | 4028352 - 4028975 | 24607.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DXC16_18005 | Not Available | Positive | 4028984 - 4029547 | 21334.7 |
| duf2795 domain-containing protein | DXC16_18010 | Not Available | Positive | 4029619 - 4029840 | 8716.91 |
| recombinase | DXC16_18015 | Not Available | Positive | 4030043 - 4031401 | 52216.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

