Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_17915 | Not Available | Positive | 4011490 - 4011738 | 9253.75 |
| hypothetical protein | DXC16_17920 | Not Available | Positive | 4011943 - 4012161 | 8004.92 |
| thioredoxin | DXC16_17925 | Not Available | Positive | 4012164 - 4012643 | 17688.5 |
| transcriptional regulator | DXC16_17930 | Not Available | Positive | 4012681 - 4013028 | 13249.2 |
| d-alanyl-d-alanine dipeptidase | DXC16_17935 | Not Available | Positive | 4013052 - 4013717 | 25274.8 |
| sam-dependent methyltransferase | DXC16_17940 | Not Available | Positive | 4013721 - 4014905 | 43813.0 |
| dna-binding response regulator | DXC16_17945 | Not Available | Negative | 4014902 - 4015585 | 26125.7 |
| sensor histidine kinase | DXC16_17950 | Not Available | Negative | 4015590 - 4017128 | 59506.4 |
| sufe family protein | DXC16_17960 | Not Available | Negative | 4019287 - 4019715 | 16169.5 |
| glutamine cyclotransferase | DXC16_17965 | Not Available | Negative | 4019727 - 4020731 | 37858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

