Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein | DXC16_17865 | Not Available | Positive | 4003909 - 4004355 | 16672.1 |
| integrase | DXC16_17870 | Not Available | Positive | 4004506 - 4005093 | 22699.9 |
| hypothetical protein | DXC16_17875 | Not Available | Negative | 4005029 - 4005238 | 8016.77 |
| hypothetical protein | DXC16_17880 | Not Available | Positive | 4005845 - 4006141 | 10955.5 |
| hypothetical protein | DXC16_17885 | Not Available | Positive | 4006256 - 4006648 | 14768.9 |
| hypothetical protein | DXC16_17890 | Not Available | Positive | 4006671 - 4007873 | 46087.8 |
| hypothetical protein | DXC16_17895 | Not Available | Negative | 4008262 - 4008465 | 7723.43 |
| glycosyl hydrolase family 88 | DXC16_17900 | Not Available | Positive | 4008798 - 4010096 | 49915.8 |
| hypothetical protein | DXC16_17905 | Not Available | Negative | 4010153 - 4010650 | 18681.7 |
| hypothetical protein | DXC16_17910 | Not Available | Negative | 4010663 - 4011310 | 24488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

