Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3836 domain-containing protein | DXC16_17810 | Not Available | Negative | 3992087 - 3992506 | 16015.9 |
| bifunctional riboflavin kinase/fad synthetase | DXC16_17820 | Not Available | Negative | 3992885 - 3993805 | 35285.5 |
| had family phosphatase | DXC16_17825 | Not Available | Negative | 3993805 - 3994419 | 24088.8 |
| calcium-translocating p-type atpase, pmca-type | DXC16_17830 | Not Available | Negative | 3994447 - 3997077 | 97112.8 |
| Trna-met | Not Available | Not Available | Positive | 3997233 - 3997309 | Not Available |
| transposase | DXC16_17840 | Not Available | Positive | 3997448 - 3998716 | 49237.0 |
| hypothetical protein | DXC16_17845 | Not Available | Positive | 3998795 - 3999661 | 33981.7 |
| hypothetical protein | DXC16_17850 | Not Available | Positive | 3999796 - 4000689 | 33839.2 |
| hypothetical protein | DXC16_17855 | Not Available | Positive | 4000857 - 4002467 | 61841.3 |
| duf3871 family protein | DXC16_17860 | Not Available | Positive | 4002830 - 4003822 | 37383.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

