Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | DXC16_17760 | Not Available | Positive | 3981580 - 3983025 | 54344.9 |
| tigr00341 family protein | DXC16_17765 | Not Available | Positive | 3983028 - 3984392 | 50535.2 |
| s46 family peptidase | DXC16_17770 | Not Available | Positive | 3984397 - 3986523 | 80074.8 |
| atp-dependent rna helicase | DXC16_17775 | Not Available | Negative | 3986844 - 3988718 | 70716.0 |
| transcriptional regulator | DXC16_17780 | Not Available | Negative | 3988980 - 3989192 | 7789.65 |
| hypothetical protein | DXC16_17785 | Not Available | Negative | 3989196 - 3989414 | 8623.85 |
| duf2975 domain-containing protein | DXC16_17790 | Not Available | Negative | 3989465 - 3990112 | 24199.5 |
| duf2975 domain-containing protein | DXC16_17795 | Not Available | Negative | 3990129 - 3990776 | 23980.7 |
| cpbp family intramembrane metalloprotease | DXC16_17800 | Not Available | Negative | 3990785 - 3991615 | 30285.8 |
| hypothetical protein | DXC16_17805 | Not Available | Negative | 3991788 - 3992087 | 11054.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

