Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DXC16_17680 | Not Available | Negative | 3955967 - 3956896 | 35816.5 |
| hypothetical protein | DXC16_17685 | Not Available | Positive | 3957179 - 3959797 | 98517.2 |
| type ii toxin-antitoxin system rele/pare family toxin | DXC16_17690 | Not Available | Positive | 3959943 - 3960284 | 13792.8 |
| xre family transcriptional regulator | DXC16_17695 | Not Available | Positive | 3960256 - 3960558 | 11061.2 |
| beta-galactosidase | DXC16_17700 | Not Available | Positive | 3960647 - 3964927 | 162396.0 |
| transporter | DXC16_17705 | Not Available | Positive | 3965018 - 3966616 | 56704.7 |
| hypothetical protein | DXC16_17720 | Not Available | Positive | 3971067 - 3972383 | 47511.9 |
| hypothetical protein | DXC16_17740 | Not Available | Negative | 3976231 - 3978897 | 95439.3 |
| site-specific integrase | DXC16_17750 | Not Available | Negative | 3979303 - 3980421 | 43299.0 |
| holliday junction branch migration dna helicase ruvb | DXC16_17755 | Not Available | Positive | 3980548 - 3981576 | 38022.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

