Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system antitoxin subunit | DXC16_17625 | Not Available | Negative | 3944704 - 3945189 | 19033.9 |
| nucleotidyltransferase domain-containing protein | DXC16_17630 | Not Available | Negative | 3945186 - 3945476 | 10799.2 |
| upxy family transcription antiterminator | DXC16_17635 | Not Available | Negative | 3945544 - 3946044 | 19034.7 |
| hypothetical protein | DXC16_17640 | Not Available | Positive | 3946322 - 3946519 | 7987.94 |
| duf4248 domain-containing protein | DXC16_17650 | Not Available | Negative | 3949246 - 3949476 | 8949.8 |
| dna-binding protein | DXC16_17655 | Not Available | Positive | 3949725 - 3950153 | 15622.9 |
| n-acetylmuramoyl-l-alanine amidase | DXC16_17660 | Not Available | Positive | 3950294 - 3950743 | 16921.3 |
| tyrosine protein kinase | DXC16_17665 | Not Available | Negative | 3950852 - 3953263 | 89861.8 |
| polysaccharide export protein | DXC16_17670 | Not Available | Negative | 3953272 - 3954063 | 28967.2 |
| undecaprenyl-phosphate glucose phosphotransferase | DXC16_17675 | Not Available | Negative | 3954111 - 3955514 | 54496.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

