Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 | DXC16_01430 | Not Available | Negative | 291132 - 293756 | 98289.4 |
| hypothetical protein | DXC16_01435 | Not Available | Positive | 293831 - 294055 | 8547.9 |
| abi family protein | DXC16_01440 | Not Available | Positive | 295018 - 295974 | 37368.1 |
| duf1016 domain-containing protein | DXC16_01455 | Not Available | Positive | 299393 - 300511 | 43177.1 |
| hypothetical protein | DXC16_01460 | Not Available | Negative | 300678 - 300980 | 11699.3 |
| hypothetical protein | DXC16_01470 | Not Available | Negative | 301161 - 301883 | 28269.1 |
| prevent-host-death protein | DXC16_01475 | Not Available | Negative | 301900 - 304548 | 100937.0 |
| fecr family protein | DXC16_01480 | Not Available | Negative | 304491 - 305441 | 36548.7 |
| rna polymerase sigma-70 factor | DXC16_01485 | Not Available | Negative | 305506 - 306072 | 22011.8 |
| rna-binding transcriptional accessory protein | DXC16_01490 | Not Available | Positive | 306252 - 308381 | 79596.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

