Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-rhamnosidase | DXC16_17525 | Not Available | Positive | 3920489 - 3922633 | 82024.8 |
| hypothetical protein | DXC16_17530 | Not Available | Negative | 3922796 - 3923224 | 16939.3 |
| mannose-1-phosphate guanylyltransferase | DXC16_17535 | Not Available | Negative | 3923228 - 3924271 | 39425.5 |
| gdp-l-fucose synthase | DXC16_17540 | Not Available | Negative | 3924286 - 3925368 | 41079.2 |
| gdp-mannose 4,6-dehydratase | DXC16_17545 | Not Available | Negative | 3925389 - 3926468 | 40983.1 |
| glycosyltransferase | DXC16_17550 | Not Available | Negative | 3926551 - 3927369 | 30937.9 |
| glycosyltransferase family 2 protein | DXC16_17555 | Not Available | Negative | 3927398 - 3928303 | 35756.9 |
| acyltransferase | DXC16_17560 | Not Available | Negative | 3928315 - 3929247 | 36432.7 |
| putative colanic acid biosynthesis acetyltransferase | DXC16_17565 | Not Available | Negative | 3929338 - 3929886 | 20719.2 |
| glycosyltransferase | DXC16_17570 | Not Available | Negative | 3929889 - 3930989 | 41630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

