Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pspc domain-containing protein | DXC16_17470 | Not Available | Negative | 3907878 - 3908114 | 9155.18 |
| class i sam-dependent methyltransferase | DXC16_17475 | Not Available | Positive | 3908282 - 3909148 | 33272.9 |
| abc transporter permease | DXC16_17480 | Not Available | Positive | 3909151 - 3910020 | 32622.6 |
| duf3098 domain-containing protein | DXC16_17485 | Not Available | Positive | 3910033 - 3910278 | 9145.44 |
| undecaprenyl-diphosphatase | DXC16_17490 | Not Available | Positive | 3910316 - 3911116 | 28480.0 |
| trna pseudouridine(55) synthase trub | DXC16_17495 | Not Available | Positive | 3911121 - 3911828 | 26653.3 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DXC16_17500 | Not Available | Positive | 3911840 - 3912895 | 40193.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DXC16_17505 | Not Available | Positive | 3912914 - 3913360 | 16503.0 |
| glycoside hydrolase family 127 protein | DXC16_17515 | Not Available | Positive | 3916521 - 3918626 | 78760.8 |
| right-handed parallel beta-helix repeat-containing protein | DXC16_17520 | Not Available | Positive | 3918651 - 3920474 | 68576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

